Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RETP07949 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.34■□□□□ 0.05
RETP07949 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
RETP07949 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.34■□□□□ 0.05
RETP07949 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.34■□□□□ 0.05
RETP07949 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.34■□□□□ 0.05
RETP07949 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RETP07949 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.34■□□□□ 0.05
RETP07949 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.34■□□□□ 0.05
RETP07949 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RETP07949 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 AC006480.2-201ENST00000609770 1337 ntBASIC15.34■□□□□ 0.05
RETP07949 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RETP07949 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RETP07949 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RETP07949 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RETP07949 AP001282.1-201ENST00000531301 1499 ntBASIC15.33■□□□□ 0.05
RETP07949 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.33■□□□□ 0.05
RETP07949 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.33■□□□□ 0.05
RETP07949 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.33■□□□□ 0.05
RETP07949 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
RETP07949 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
RETP07949 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.33■□□□□ 0.05
RETP07949 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.33■□□□□ 0.04
RETP07949 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 AL138799.1-201ENST00000448213 1675 ntBASIC15.33■□□□□ 0.04
RETP07949 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 AL355334.1-201ENST00000417713 215 ntBASIC15.33■□□□□ 0.04
RETP07949 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.33■□□□□ 0.04
RETP07949 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.33■□□□□ 0.04
RETP07949 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.33■□□□□ 0.04
RETP07949 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.33■□□□□ 0.04
RETP07949 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.33■□□□□ 0.04
RETP07949 RN7SL774P-201ENST00000577467 290 ntBASIC15.33■□□□□ 0.04
RETP07949 AP003419.4-201ENST00000616071 517 ntBASIC15.33■□□□□ 0.04
RETP07949 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.33■□□□□ 0.04
RETP07949 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RETP07949 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 AC006486.2-201ENST00000624246 2199 ntBASIC15.33■□□□□ 0.04
RETP07949 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RETP07949 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.33■□□□□ 0.04
RETP07949 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RETP07949 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.33■□□□□ 0.04
RETP07949 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.32■□□□□ 0.04
RETP07949 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RETP07949 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RETP07949 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 AL133267.1-201ENST00000398220 340 ntBASIC15.32■□□□□ 0.04
RETP07949 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RETP07949 ACTBP8-201ENST00000403258 1108 ntBASIC15.32■□□□□ 0.04
RETP07949 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.32■□□□□ 0.04
RETP07949 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 RN7SL818P-201ENST00000485099 259 ntBASIC15.32■□□□□ 0.04
RETP07949 GAPDHP40-201ENST00000505218 1006 ntBASIC15.32■□□□□ 0.04
RETP07949 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RETP07949 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
RETP07949 RN7SL725P-201ENST00000606439 259 ntBASIC15.32■□□□□ 0.04
RETP07949 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms