Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.65■□□□□ 0.1
TOP3BO95985 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 AC007191.1-201ENST00000623179 2995 ntBASIC15.65■□□□□ 0.1
TOP3BO95985 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.65■□□□□ 0.1
TOP3BO95985 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.65■□□□□ 0.1
TOP3BO95985 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 MIR663B-201ENST00000408361 115 ntBASIC15.65■□□□□ 0.1
TOP3BO95985 AZGP1P1-201ENST00000411909 902 ntBASIC15.65■□□□□ 0.1
TOP3BO95985 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.65■□□□□ 0.1
TOP3BO95985 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 SERBP1P3-201ENST00000459980 809 ntBASIC15.65■□□□□ 0.1
TOP3BO95985 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.65■□□□□ 0.1
TOP3BO95985 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.65■□□□□ 0.1
TOP3BO95985 RNA5SP412-201ENST00000516234 123 ntBASIC15.65■□□□□ 0.1
TOP3BO95985 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 C2orf69P2-201ENST00000562032 1123 ntBASIC15.65■□□□□ 0.1
TOP3BO95985 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.65■□□□□ 0.1
TOP3BO95985 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.65■□□□□ 0.1
TOP3BO95985 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.65■□□□□ 0.1
TOP3BO95985 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TOP3BO95985 CICP11-201ENST00000434745 2827 ntBASIC15.65■□□□□ 0.1
TOP3BO95985 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.65■□□□□ 0.1
TOP3BO95985 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.65■□□□□ 0.1
TOP3BO95985 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TOP3BO95985 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TOP3BO95985 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TOP3BO95985 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TOP3BO95985 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.64■□□□□ 0.09
TOP3BO95985 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TOP3BO95985 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.64■□□□□ 0.09
TOP3BO95985 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.64■□□□□ 0.09
TOP3BO95985 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.64■□□□□ 0.09
TOP3BO95985 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.64■□□□□ 0.09
TOP3BO95985 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TOP3BO95985 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TOP3BO95985 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.64■□□□□ 0.09
TOP3BO95985 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.63■□□□□ 0.09
TOP3BO95985 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TOP3BO95985 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms