Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.36■□□□□ 0.21
CSPG5O95196 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG5O95196 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CSPG5O95196 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG5O95196 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CSPG5O95196 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG5O95196 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CSPG5O95196 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CSPG5O95196 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.35■□□□□ 0.21
CSPG5O95196 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG5O95196 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG5O95196 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG5O95196 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.35■□□□□ 0.21
CSPG5O95196 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CSPG5O95196 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG5O95196 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.35■□□□□ 0.21
CSPG5O95196 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CSPG5O95196 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG5O95196 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CSPG5O95196 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CSPG5O95196 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 DBET-201ENST00000630918 3363 ntBASIC16.35■□□□□ 0.21
CSPG5O95196 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 AL161772.1-201ENST00000610494 4412 ntBASIC16.35■□□□□ 0.21
CSPG5O95196 AC067930.6-201ENST00000623257 4947 ntBASIC16.35■□□□□ 0.21
CSPG5O95196 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG5O95196 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.34■□□□□ 0.21
CSPG5O95196 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 AC023824.1-201ENST00000562945 2975 ntBASIC16.34■□□□□ 0.21
CSPG5O95196 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.34■□□□□ 0.21
CSPG5O95196 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.34■□□□□ 0.21
CSPG5O95196 LDHBP1-201ENST00000455730 1119 ntBASIC16.34■□□□□ 0.21
CSPG5O95196 RN7SL769P-201ENST00000469386 295 ntBASIC16.34■□□□□ 0.21
CSPG5O95196 RN7SL720P-201ENST00000488178 304 ntBASIC16.34■□□□□ 0.21
CSPG5O95196 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.34■□□□□ 0.21
CSPG5O95196 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.34■□□□□ 0.21
CSPG5O95196 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CSPG5O95196 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.34■□□□□ 0.21
CSPG5O95196 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.34■□□□□ 0.21
CSPG5O95196 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.34■□□□□ 0.21
CSPG5O95196 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.34■□□□□ 0.21
CSPG5O95196 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 KRT8P19-201ENST00000551916 1455 ntBASIC16.34■□□□□ 0.21
CSPG5O95196 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CSPG5O95196 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CSPG5O95196 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSPG5O95196 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.34■□□□□ 0.21
CSPG5O95196 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSPG5O95196 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms