Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 TOMM22P5-201ENST00000416399 439 ntBASIC15.3■□□□□ 0.04
RFPL1O75677 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 AL121723.1-201ENST00000445194 1519 ntBASIC15.3■□□□□ 0.04
RFPL1O75677 AC009477.1-201ENST00000452936 217 ntBASIC15.3■□□□□ 0.04
RFPL1O75677 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.3■□□□□ 0.04
RFPL1O75677 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RFPL1O75677 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.3■□□□□ 0.04
RFPL1O75677 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RFPL1O75677 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFPL1O75677 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 LINC01115-203ENST00000606068 577 ntBASIC15.3■□□□□ 0.04
RFPL1O75677 AL589739.1-201ENST00000607720 493 ntBASIC15.3■□□□□ 0.04
RFPL1O75677 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFPL1O75677 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 AC015802.1-201ENST00000588104 1449 ntBASIC15.29■□□□□ 0.04
RFPL1O75677 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.29■□□□□ 0.04
RFPL1O75677 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 LILRP1-201ENST00000444199 1370 ntBASIC15.29■□□□□ 0.04
RFPL1O75677 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 AC087499.5-201ENST00000452760 1342 ntBASIC15.29■□□□□ 0.04
RFPL1O75677 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.29■□□□□ 0.04
RFPL1O75677 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.29■□□□□ 0.04
RFPL1O75677 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.29■□□□□ 0.04
RFPL1O75677 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.29■□□□□ 0.04
RFPL1O75677 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.29■□□□□ 0.04
RFPL1O75677 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.29■□□□□ 0.04
RFPL1O75677 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.29■□□□□ 0.04
RFPL1O75677 TEX28P1-201ENST00000613479 1221 ntBASIC15.29■□□□□ 0.04
RFPL1O75677 TEX28P2-201ENST00000617764 1221 ntBASIC15.29■□□□□ 0.04
RFPL1O75677 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.29■□□□□ 0.04
RFPL1O75677 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFPL1O75677 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.29■□□□□ 0.04
RFPL1O75677 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RFPL1O75677 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms