Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 FAM45BP-202ENST00000592932 1624 ntBASIC14.26□□□□□ -0.13
CTNSO60931 TCAF2P1-201ENST00000291129 2421 ntBASIC14.26□□□□□ -0.13
CTNSO60931 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTNSO60931 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTNSO60931 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 AC018665.1-201ENST00000622927 1362 ntBASIC14.26□□□□□ -0.13
CTNSO60931 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTNSO60931 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 AC092933.1-201ENST00000393644 945 ntBASIC14.26□□□□□ -0.13
CTNSO60931 KRT43P-201ENST00000434019 910 ntBASIC14.26□□□□□ -0.13
CTNSO60931 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.26□□□□□ -0.13
CTNSO60931 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.26□□□□□ -0.13
CTNSO60931 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.26□□□□□ -0.13
CTNSO60931 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.26□□□□□ -0.13
CTNSO60931 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.26□□□□□ -0.13
CTNSO60931 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 AL162274.1-201ENST00000617191 1098 ntBASIC14.26□□□□□ -0.13
CTNSO60931 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 AC132938.4-201ENST00000623835 848 ntBASIC14.26□□□□□ -0.13
CTNSO60931 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.26□□□□□ -0.13
CTNSO60931 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTNSO60931 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTNSO60931 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.25□□□□□ -0.13
CTNSO60931 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CTNSO60931 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.25□□□□□ -0.13
CTNSO60931 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CTNSO60931 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CTNSO60931 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.25□□□□□ -0.13
CTNSO60931 EIF3FP3-201ENST00000434851 1086 ntBASIC14.25□□□□□ -0.13
CTNSO60931 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CTNSO60931 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.25□□□□□ -0.13
CTNSO60931 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.25□□□□□ -0.13
CTNSO60931 AC106760.1-201ENST00000508690 800 ntBASIC14.25□□□□□ -0.13
CTNSO60931 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CTNSO60931 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.25□□□□□ -0.13
CTNSO60931 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.25□□□□□ -0.13
CTNSO60931 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.25□□□□□ -0.13
CTNSO60931 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.25□□□□□ -0.13
CTNSO60931 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CTNSO60931 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 ACE3P-201ENST00000423435 1973 ntBASIC14.25□□□□□ -0.13
CTNSO60931 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CTNSO60931 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTNSO60931 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 AL138709.1-201ENST00000614840 1693 ntBASIC14.24□□□□□ -0.13
CTNSO60931 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms