Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.48□□□□□ -0.73
NDUFA1O15239 AC084364.1-201ENST00000551967 1556 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC018529.2-202ENST00000611482 3087 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 FP325330.2-201ENST00000624219 5630 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC142381.1-201ENST00000426099 345 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.47□□□□□ -0.73
NDUFA1O15239 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.47□□□□□ -0.73
NDUFA1O15239 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.47□□□□□ -0.73
NDUFA1O15239 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC026120.1-201ENST00000611536 926 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 BX640515.1-201ENST00000617215 977 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.47□□□□□ -0.73
NDUFA1O15239 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC092865.6-201ENST00000642101 219 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 TCAF1P1-201ENST00000414990 2232 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 CICP17-201ENST00000418553 2377 ntBASIC10.47□□□□□ -0.73
NDUFA1O15239 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.47□□□□□ -0.73
NDUFA1O15239 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.47□□□□□ -0.73
NDUFA1O15239 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
NDUFA1O15239 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
NDUFA1O15239 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
NDUFA1O15239 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
NDUFA1O15239 AC018442.1-201ENST00000421439 2061 ntBASIC10.46□□□□□ -0.73
NDUFA1O15239 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.46□□□□□ -0.73
NDUFA1O15239 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.46□□□□□ -0.73
NDUFA1O15239 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
NDUFA1O15239 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
NDUFA1O15239 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
NDUFA1O15239 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
NDUFA1O15239 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
NDUFA1O15239 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
NDUFA1O15239 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
NDUFA1O15239 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
NDUFA1O15239 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms