Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
E2F3O00716 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
E2F3O00716 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.87□□□□□ -0.03
E2F3O00716 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.87□□□□□ -0.03
E2F3O00716 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.87□□□□□ -0.03
E2F3O00716 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
E2F3O00716 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
E2F3O00716 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 DRD5P1-201ENST00000456605 1438 ntBASIC14.86□□□□□ -0.03
E2F3O00716 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
E2F3O00716 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.86□□□□□ -0.03
E2F3O00716 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
E2F3O00716 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.86□□□□□ -0.03
E2F3O00716 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.86□□□□□ -0.03
E2F3O00716 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
E2F3O00716 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 AC104794.3-201ENST00000566840 1248 ntBASIC14.86□□□□□ -0.03
E2F3O00716 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.86□□□□□ -0.03
E2F3O00716 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.86□□□□□ -0.03
E2F3O00716 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.86□□□□□ -0.03
E2F3O00716 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.86□□□□□ -0.03
E2F3O00716 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.86□□□□□ -0.03
E2F3O00716 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
E2F3O00716 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 AC093525.8-201ENST00000624099 1342 ntBASIC14.86□□□□□ -0.03
E2F3O00716 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.86□□□□□ -0.03
E2F3O00716 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
E2F3O00716 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
E2F3O00716 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
E2F3O00716 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 AC067930.6-201ENST00000623257 4947 ntBASIC14.85□□□□□ -0.03
E2F3O00716 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
E2F3O00716 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.85□□□□□ -0.03
E2F3O00716 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.85□□□□□ -0.03
E2F3O00716 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.85□□□□□ -0.03
E2F3O00716 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms