Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AC023310.1-201ENST00000554836 735 ntBASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AC103810.3-201ENST00000583567 96 ntBASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 AC010328.2-201ENST00000597698 1111 ntBASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 MIR6787-201ENST00000616675 61 ntBASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.02■□□□□ -0
TMX2-CTNND1H3BSU7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMX2-CTNND1H3BSU7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL133267.1-201ENST00000398220 340 ntBASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 KRT18P64-201ENST00000434946 1219 ntBASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 FTH1P14-201ENST00000482930 551 ntBASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC026410.3-201ENST00000514280 936 ntBASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 HNRNPUP1-201ENST00000554987 333 ntBASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL121723.1-201ENST00000445194 1519 ntBASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMX2-CTNND1H3BSU7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms