Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 AC067930.6-201ENST00000623257 4947 ntBASIC16.18■□□□□ 0.18
RCCD1A6NED2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 RN7SL618P-201ENST00000477850 296 ntBASIC16.18■□□□□ 0.18
RCCD1A6NED2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 AC022447.6-201ENST00000515522 438 ntBASIC16.18■□□□□ 0.18
RCCD1A6NED2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 AC109322.1-201ENST00000524499 1264 ntBASIC16.18■□□□□ 0.18
RCCD1A6NED2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RCCD1A6NED2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCCD1A6NED2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 SDHAP3-202ENST00000515467 728 ntBASIC16.17■□□□□ 0.18
RCCD1A6NED2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 AC026790.2-201ENST00000606282 430 ntBASIC16.17■□□□□ 0.18
RCCD1A6NED2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RCCD1A6NED2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCCD1A6NED2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.16■□□□□ 0.18
RCCD1A6NED2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AL844908.2-201ENST00000609461 460 ntBASIC16.16■□□□□ 0.18
RCCD1A6NED2 AL391069.4-201ENST00000609583 481 ntBASIC16.16■□□□□ 0.18
RCCD1A6NED2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AC103798.2-201ENST00000624292 632 ntBASIC16.16■□□□□ 0.18
RCCD1A6NED2 AC092723.2-201ENST00000624955 793 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms