Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 AC119751.2-201ENST00000504529 210 ntBASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 AC106760.1-201ENST00000508690 800 ntBASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 MIR6775-201ENST00000617557 69 ntBASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 PKD1P5-201ENST00000532415 10291 ntBASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 AC093525.8-201ENST00000624099 1342 ntBASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 PDIA3P1-201ENST00000471856 1510 ntBASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 ANKRD19P-201ENST00000338192 862 ntBASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 AC092933.1-201ENST00000393644 945 ntBASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 AP005019.2-201ENST00000615104 511 ntBASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.02■□□□□ 0.32
COL4A3BPQ9Y5P4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 AP000845.1-201ENST00000581677 2131 ntBASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL4A3BPQ9Y5P4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 LINC01101-201ENST00000622953 1884 ntBASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL4A3BPQ9Y5P4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms