Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FAM220BP-201ENST00000377689 816 ntBASIC14.45□□□□□ -0.1
AP4S1Q9Y587 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 AC026979.3-201ENST00000607315 403 ntBASIC14.45□□□□□ -0.1
AP4S1Q9Y587 AL031008.1-201ENST00000619963 541 ntBASIC14.45□□□□□ -0.1
AP4S1Q9Y587 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AC018712.1-201ENST00000455767 687 ntBASIC14.44□□□□□ -0.1
AP4S1Q9Y587 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 UNC93B6-202ENST00000528242 690 ntBASIC14.44□□□□□ -0.1
AP4S1Q9Y587 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.44□□□□□ -0.1
AP4S1Q9Y587 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AP4S1Q9Y587 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms