Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 ACE3P-201ENST00000423435 1973 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 REXO1L5P-201ENST00000622260 2098 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AL035633.1-201ENST00000406139 838 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AP005018.1-201ENST00000525475 301 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AC015936.2-201ENST00000593177 259 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AC126755.1-201ENST00000525846 6405 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 LRRC59-203ENST00000576448 1531 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 AL157414.3-201ENST00000624276 1954 ntBASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDGFL3Q9Y3E1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 KRT8P35-201ENST00000483942 1338 ntBASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 BAATP1-201ENST00000412284 1225 ntBASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 AC012441.1-201ENST00000446669 685 ntBASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 RN7SL837P-201ENST00000463010 287 ntBASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 GIMAP3P-201ENST00000495150 836 ntBASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 TDH-203ENST00000531764 1110 ntBASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 MIR5189-201ENST00000577370 114 ntBASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HDGFL3Q9Y3E1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 267.8 ms