Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 AL359881.3-201ENST00000602640 1721 ntBASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 UGT1A2P-201ENST00000454886 866 ntBASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AC093004.1-201ENST00000508850 424 ntBASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 SPDYE18-201ENST00000510091 1050 ntBASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AL391069.4-201ENST00000609583 481 ntBASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAPPC4Q9Y296 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 SPDYE19P-201ENST00000338590 713 ntBASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 SPTLC1P1-201ENST00000447199 261 ntBASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 TPRX2P-201ENST00000535362 881 ntBASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 AL645728.2-202ENST00000641679 227 ntBASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC4Q9Y296 CICP20-201ENST00000443330 2801 ntBASIC14□□□□□ -0.17
TRAPPC4Q9Y296 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms