Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC097376.2-205ENST00000610159 5334 ntBASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC105233.2-201ENST00000523697 349 ntBASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AF228730.5-201ENST00000530288 346 ntBASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AL358472.5-202ENST00000641448 1267 ntBASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AL365209.1-201ENST00000624418 6473 ntBASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCM2LQ9NUG4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AL139010.1-201ENST00000454878 894 ntBASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AC243562.1-201ENST00000560672 389 ntBASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms