Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 CNN2P10-201ENST00000443067 918 ntBASIC15.77■□□□□ 0.12
HPS4Q9NQG7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 AL096828.3-201ENST00000615354 462 ntBASIC15.77■□□□□ 0.12
HPS4Q9NQG7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 AC084364.1-201ENST00000551967 1556 ntBASIC15.77■□□□□ 0.11
HPS4Q9NQG7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.77■□□□□ 0.11
HPS4Q9NQG7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AL158070.2-201ENST00000623713 1621 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AC099063.4-201ENST00000641099 1602 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AC004066.1-201ENST00000502488 802 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AP006547.1-201ENST00000563435 692 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AC104982.3-201ENST00000581995 514 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 ENPP7P14-201ENST00000621765 1040 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 LRRC59-203ENST00000576448 1531 ntBASIC15.76■□□□□ 0.11
HPS4Q9NQG7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms