Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 KRT8P37-201ENST00000451609 1420 ntBASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 AL138918.1-201ENST00000568306 659 ntBASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 AL773604.1-201ENST00000617417 272 ntBASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 AC004877.2-201ENST00000623941 599 ntBASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 AL136982.4-201ENST00000437689 1740 ntBASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AC002056.1-201ENST00000395613 760 ntBASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AC093909.1-201ENST00000504731 1122 ntBASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 RNA5SP410-201ENST00000516285 106 ntBASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 RNA5SP415-201ENST00000517246 115 ntBASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AL049840.3-201ENST00000602669 611 ntBASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 MIR7706-201ENST00000613747 67 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms