Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 RNA5SP486-201ENST00000515961 83 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 AP000812.2-201ENST00000538934 718 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 AC244669.2-201ENST00000612320 853 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 AC006058.4-201ENST00000624016 1670 ntBASIC17.9■□□□□ 0.46
RNF41Q9H4P4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 RPL7P3-201ENST00000441388 714 ntBASIC17.9■□□□□ 0.46
RNF41Q9H4P4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 HILS1-202ENST00000545329 423 ntBASIC17.9■□□□□ 0.46
RNF41Q9H4P4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF41Q9H4P4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNF41Q9H4P4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.89■□□□□ 0.46
RNF41Q9H4P4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNF41Q9H4P4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RNF41Q9H4P4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNF41Q9H4P4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
RNF41Q9H4P4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 GK-202ENST00000378941 458 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 CD8B2-202ENST00000417670 633 ntBASIC17.89■□□□□ 0.45
RNF41Q9H4P4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 KLF2P4-201ENST00000451959 1225 ntBASIC17.89■□□□□ 0.45
RNF41Q9H4P4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 PCDHA3-202ENST00000532566 4594 ntBASIC17.89■□□□□ 0.45
RNF41Q9H4P4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF41Q9H4P4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms