Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC018892.3-201ENST00000623986 2499 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 TERF1P1-201ENST00000311003 1181 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 RNU1-129P-201ENST00000384064 167 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 RCN1P1-201ENST00000400413 996 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 IGHV3-47-201ENST00000425060 335 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 DRAXINP1-201ENST00000437611 948 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC104819.1-201ENST00000504587 486 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 NMU-205ENST00000511469 756 ntTSL 3 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AL136038.3-201ENST00000561909 1096 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC074051.2-201ENST00000565115 352 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MIR4313-201ENST00000580760 101 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 U1.21-201ENST00000580816 167 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MIR4515-201ENST00000584082 81 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 NKAPP1-205ENST00000585790 367 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC092329.2-201ENST00000598402 547 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AL031055.1-201ENST00000606362 631 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC022726.2-201ENST00000634673 547 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC097493.4-201ENST00000641197 219 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 629.8 ms