Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 AC074044.1-201ENST00000609673 707 ntBASIC17.36■□□□□ 0.37
CCDC94Q9BW85 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC94Q9BW85 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 AC004461.2-201ENST00000629517 803 ntBASIC17.35■□□□□ 0.37
CCDC94Q9BW85 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC94Q9BW85 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC94Q9BW85 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms