Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 CYP4F24P-201ENST00000586049 1580 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AC027601.5-201ENST00000624065 2482 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 INE1-201ENST00000456273 945 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 GIMAP3P-201ENST00000495150 836 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AC011495.1-201ENST00000498085 584 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AL359881.2-201ENST00000602973 570 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AC099568.2-201ENST00000609194 695 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AC074044.1-201ENST00000609673 707 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 AL008721.1-201ENST00000609964 604 ntBASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF4Q9BUZ4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF4Q9BUZ4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAF4Q9BUZ4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAF4Q9BUZ4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF4Q9BUZ4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAF4Q9BUZ4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 U91328.1-201ENST00000437528 223 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AL589987.1-201ENST00000453380 819 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC023310.3-201ENST00000557027 670 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC100756.1-201ENST00000562736 682 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC138749.3-201ENST00000567691 622 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC092337.1-201ENST00000568699 1129 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms