Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AC125807.1-201ENST00000483097 614 ntBASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SPDYE12P-201ENST00000618416 771 ntBASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AC093028.1-201ENST00000622998 982 ntBASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AL033527.5-202ENST00000641632 1098 ntBASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHRDL1Q9BU40 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 FO538757.1-201ENST00000623083 1397 ntBASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms