Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC019227.1-201ENST00000526902 510 ntBASIC13.79□□□□□ -0.2
USB1Q9BQ65 ENPP7P5-201ENST00000541031 1031 ntBASIC13.79□□□□□ -0.2
USB1Q9BQ65 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC092552.1-201ENST00000547243 906 ntBASIC13.79□□□□□ -0.2
USB1Q9BQ65 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 HNRNPUP1-201ENST00000554987 333 ntBASIC13.79□□□□□ -0.2
USB1Q9BQ65 MEG8-217ENST00000556637 924 ntTSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC005089.1-201ENST00000619486 2241 ntBASIC13.79□□□□□ -0.2
USB1Q9BQ65 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 NORAD-201ENST00000565493 5339 ntBASIC13.78□□□□□ -0.2
USB1Q9BQ65 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 DGCR5-201ENST00000399539 862 ntBASIC13.78□□□□□ -0.2
USB1Q9BQ65 AL512384.1-201ENST00000406683 331 ntBASIC13.78□□□□□ -0.2
USB1Q9BQ65 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 KRT18P43-201ENST00000469825 1281 ntBASIC13.78□□□□□ -0.2
USB1Q9BQ65 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 AC106886.1-201ENST00000568660 600 ntBASIC13.78□□□□□ -0.2
USB1Q9BQ65 AL365223.1-201ENST00000574864 1297 ntBASIC13.78□□□□□ -0.2
USB1Q9BQ65 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 AL391069.4-201ENST00000609583 481 ntBASIC13.78□□□□□ -0.2
USB1Q9BQ65 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms