Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
RNF2Q99496 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF2Q99496 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RNF2Q99496 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.24□□□□□ -0.45
RNF2Q99496 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.24□□□□□ -0.45
RNF2Q99496 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF2Q99496 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RNF2Q99496 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF2Q99496 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF2Q99496 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.23□□□□□ -0.45
RNF2Q99496 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF2Q99496 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF2Q99496 GPS2P2-201ENST00000430745 888 ntBASIC12.23□□□□□ -0.45
RNF2Q99496 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF2Q99496 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF2Q99496 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
RNF2Q99496 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.23□□□□□ -0.45
RNF2Q99496 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.23□□□□□ -0.45
RNF2Q99496 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RNF2Q99496 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 AL031595.1-201ENST00000623969 4709 ntBASIC12.23□□□□□ -0.45
RNF2Q99496 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF2Q99496 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RNF2Q99496 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RNF2Q99496 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF2Q99496 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RNF2Q99496 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF2Q99496 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF2Q99496 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF2Q99496 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF2Q99496 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RNF2Q99496 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF2Q99496 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF2Q99496 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RNF2Q99496 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF2Q99496 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
RNF2Q99496 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RNF2Q99496 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF2Q99496 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RNF2Q99496 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF2Q99496 AL353705.2-201ENST00000428243 662 ntBASIC12.22□□□□□ -0.45
RNF2Q99496 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.22□□□□□ -0.45
RNF2Q99496 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.22□□□□□ -0.45
RNF2Q99496 SPDYE14P-201ENST00000442619 822 ntBASIC12.22□□□□□ -0.45
RNF2Q99496 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms