Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 MST1P2-201ENST00000457982 2291 ntBASIC12.41□□□□□ -0.42
RAB40CQ96S21 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.41□□□□□ -0.42
RAB40CQ96S21 FO393414.2-201ENST00000405153 598 ntBASIC12.41□□□□□ -0.42
RAB40CQ96S21 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 KRT18P2-201ENST00000447938 1258 ntBASIC12.41□□□□□ -0.42
RAB40CQ96S21 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB40CQ96S21 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB40CQ96S21 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 AC104457.1-201ENST00000401024 814 ntBASIC12.4□□□□□ -0.42
RAB40CQ96S21 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 MED15P5-201ENST00000423150 992 ntBASIC12.4□□□□□ -0.42
RAB40CQ96S21 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 KRT18P3-201ENST00000451602 1288 ntBASIC12.4□□□□□ -0.42
RAB40CQ96S21 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 FAM86C2P-203ENST00000528684 1004 ntBASIC12.4□□□□□ -0.42
RAB40CQ96S21 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 AC018845.2-201ENST00000568326 409 ntBASIC12.4□□□□□ -0.42
RAB40CQ96S21 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 FAM197Y3-203ENST00000618346 717 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms