Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AC126177.1-201ENST00000547829 2218 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.69■□□□□ 0.1
RPRD1AQ96P16 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 PDIA3P1-201ENST00000471856 1510 ntBASIC15.69■□□□□ 0.1
RPRD1AQ96P16 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 AC006486.2-201ENST00000624246 2199 ntBASIC15.69■□□□□ 0.1
RPRD1AQ96P16 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 ATP5G2P4-201ENST00000442175 420 ntBASIC15.69■□□□□ 0.1
RPRD1AQ96P16 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RPRD1AQ96P16 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 AC025279.2-201ENST00000569730 653 ntBASIC15.68■□□□□ 0.1
RPRD1AQ96P16 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 AC244669.2-201ENST00000612320 853 ntBASIC15.68■□□□□ 0.1
RPRD1AQ96P16 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPRD1AQ96P16 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms