Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 AC138466.3-201ENST00000619983 221 ntBASIC16.37■□□□□ 0.21
SNX27Q96L92 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SNX27Q96L92 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SNX27Q96L92 REXO1L2P-201ENST00000425429 2069 ntBASIC16.37■□□□□ 0.21
SNX27Q96L92 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
SNX27Q96L92 WASH3P-207ENST00000560956 1394 ntBASIC16.37■□□□□ 0.21
SNX27Q96L92 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX27Q96L92 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX27Q96L92 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX27Q96L92 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.36■□□□□ 0.21
SNX27Q96L92 CNN2P10-201ENST00000443067 918 ntBASIC16.36■□□□□ 0.21
SNX27Q96L92 UPF3AP2-201ENST00000457924 1132 ntBASIC16.36■□□□□ 0.21
SNX27Q96L92 RPL13AP20-201ENST00000459725 609 ntBASIC16.36■□□□□ 0.21
SNX27Q96L92 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.36■□□□□ 0.21
SNX27Q96L92 MESTP3-201ENST00000503460 968 ntBASIC16.36■□□□□ 0.21
SNX27Q96L92 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX27Q96L92 AC106820.3-201ENST00000561653 397 ntBASIC16.36■□□□□ 0.21
SNX27Q96L92 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SNX27Q96L92 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SNX27Q96L92 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.36■□□□□ 0.21
SNX27Q96L92 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNX27Q96L92 HYMAI-201ENST00000635591 3347 ntBASIC16.36■□□□□ 0.21
SNX27Q96L92 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX27Q96L92 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX27Q96L92 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNX27Q96L92 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX27Q96L92 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
SNX27Q96L92 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SNX27Q96L92 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX27Q96L92 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SNX27Q96L92 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.35■□□□□ 0.21
SNX27Q96L92 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX27Q96L92 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 AL391280.1-201ENST00000506969 1062 ntBASIC16.35■□□□□ 0.21
SNX27Q96L92 FAM86HP-204ENST00000513466 959 ntBASIC16.35■□□□□ 0.21
SNX27Q96L92 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.35■□□□□ 0.21
SNX27Q96L92 AL109954.1-202ENST00000564051 2148 ntBASIC16.35■□□□□ 0.21
SNX27Q96L92 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX27Q96L92 RN7SL560P-201ENST00000577943 264 ntBASIC16.35■□□□□ 0.21
SNX27Q96L92 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.35■□□□□ 0.21
SNX27Q96L92 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX27Q96L92 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.35■□□□□ 0.21
SNX27Q96L92 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX27Q96L92 OR10B1P-201ENST00000601666 907 ntBASIC16.35■□□□□ 0.21
SNX27Q96L92 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms