Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 KRT8P14-201ENST00000414254 1442 ntBASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AC106881.1-201ENST00000605849 3329 ntBASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 CNN2P10-201ENST00000443067 918 ntBASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AP006547.1-201ENST00000563435 692 ntBASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 AC015818.8-201ENST00000587907 1519 ntBASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHKBP1Q8TBC3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 EIF3FP3-201ENST00000434851 1086 ntBASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AC245100.3-201ENST00000441281 285 ntBASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AP001258.2-201ENST00000529891 490 ntBASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 SAMD11P1-201ENST00000571429 661 ntBASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SHKBP1Q8TBC3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 AC092127.1-201ENST00000567093 3455 ntBASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SHKBP1Q8TBC3 AC006058.4-201ENST00000624016 1670 ntBASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms