Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 AC020763.4-201ENST00000623414 4170 ntBASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 AL162727.3-201ENST00000635661 2787 ntBASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 PSMD4P1-201ENST00000433951 1109 ntBASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 AP000358.1-201ENST00000456260 156 ntBASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 AL161773.1-201ENST00000624845 863 ntBASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 KRT8P28-201ENST00000433288 1390 ntBASIC23.17■■□□□ 1.3
CFAP43Q8NDM7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 AL357563.1-201ENST00000404728 395 ntBASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 CHCHD2P9-201ENST00000461726 456 ntBASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 PHBP15-201ENST00000574228 665 ntBASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 AC008894.3-201ENST00000624324 3103 ntBASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 FRMPD2B-201ENST00000431305 1347 ntBASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 AC090502.4-201ENST00000551714 1386 ntBASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP43Q8NDM7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 AC007292.2-201ENST00000593524 1812 ntBASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 RN7SL81P-201ENST00000493781 261 ntBASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 MIR5196-201ENST00000578146 115 ntBASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 FO393412.1-201ENST00000619841 382 ntBASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP43Q8NDM7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms