Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 AC138466.3-201ENST00000619983 221 ntBASIC16.42■□□□□ 0.22
HERC6Q8IVU3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC6Q8IVU3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 PAUPAR-201ENST00000630360 2965 ntBASIC16.41■□□□□ 0.22
HERC6Q8IVU3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AL157791.1-201ENST00000553667 1699 ntBASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AC105917.1-201ENST00000506637 2539 ntBASIC16.41■□□□□ 0.22
HERC6Q8IVU3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 GHSR-202ENST00000427970 912 ntBASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AC020922.3-201ENST00000595064 547 ntBASIC16.41■□□□□ 0.22
HERC6Q8IVU3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 CLUHP2-201ENST00000426660 1303 ntBASIC16.41■□□□□ 0.22
HERC6Q8IVU3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC6Q8IVU3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 AL355334.1-201ENST00000417713 215 ntBASIC16.4■□□□□ 0.22
HERC6Q8IVU3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 AC125604.1-201ENST00000496255 707 ntBASIC16.4■□□□□ 0.22
HERC6Q8IVU3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 AC073352.2-201ENST00000609385 439 ntBASIC16.4■□□□□ 0.22
HERC6Q8IVU3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 AC068587.8-201ENST00000641239 219 ntBASIC16.4■□□□□ 0.22
HERC6Q8IVU3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC6Q8IVU3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms