Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 INE1-201ENST00000456273 945 ntBASIC13.81□□□□□ -0.2
ATG4DQ86TL0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AC132938.2-201ENST00000579188 680 ntBASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 IGHV3-72-202ENST00000621503 303 ntBASIC13.81□□□□□ -0.2
ATG4DQ86TL0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AL358472.5-202ENST00000641448 1267 ntBASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AL591163.1-201ENST00000641757 987 ntBASIC13.81□□□□□ -0.2
ATG4DQ86TL0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AC018529.2-202ENST00000611482 3087 ntBASIC13.8□□□□□ -0.2
ATG4DQ86TL0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 SOCS2P1-201ENST00000417727 557 ntBASIC13.8□□□□□ -0.2
ATG4DQ86TL0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 MYCLP2-201ENST00000449268 967 ntBASIC13.8□□□□□ -0.2
ATG4DQ86TL0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 ELK1P1-201ENST00000485699 580 ntBASIC13.8□□□□□ -0.2
ATG4DQ86TL0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.8□□□□□ -0.2
ATG4DQ86TL0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATG4DQ86TL0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms