Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 THY1-209ENST00000580275 578 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13DQ5THJ4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AL118508.1-201ENST00000613502 2345 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 PRORSD1P-202ENST00000563365 2154 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 RPSAP15-201ENST00000448168 861 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC006548.2-201ENST00000605217 529 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC020658.6-201ENST00000623564 1870 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 FAM90A2P-201ENST00000511144 1395 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 FAM90A25P-201ENST00000528404 1395 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC026691.1-201ENST00000602502 2017 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC148477.9-201ENST00000623974 539 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC067931.2-201ENST00000623655 2003 ntBASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13DQ5THJ4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 AL807761.2-201ENST00000422849 729 ntBASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13DQ5THJ4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 CICP23-201ENST00000605013 2741 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 FAM86KP-201ENST00000509817 987 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AC012158.2-201ENST00000536546 354 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AC140113.1-201ENST00000603467 169 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 FO393412.1-201ENST00000619841 382 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SALL4P5-201ENST00000419001 1760 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AC139712.1-201ENST00000378256 1875 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AL354861.1-201ENST00000445213 355 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 RPL7P35-201ENST00000446943 740 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms