Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 BTBD6P1-201ENST00000412176 1267 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC079178.1-201ENST00000420915 656 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC007969.1-201ENST00000433675 447 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AL022328.3-201ENST00000607943 679 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC005695.3-201ENST00000614522 232 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 AC013268.4-201ENST00000637413 2228 ntBASIC20.52■□□□□ 0.88
CGNL1Q0VF96 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 KRT8P4-201ENST00000509735 1454 ntBASIC20.52■□□□□ 0.88
CGNL1Q0VF96 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.52■□□□□ 0.88
CGNL1Q0VF96 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGNL1Q0VF96 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 RN7SKP175-201ENST00000408472 289 ntBASIC20.52■□□□□ 0.87
CGNL1Q0VF96 CHMP1AP1-201ENST00000445563 662 ntBASIC20.52■□□□□ 0.87
CGNL1Q0VF96 AL591846.1-201ENST00000451736 433 ntBASIC20.52■□□□□ 0.87
CGNL1Q0VF96 AP001258.2-201ENST00000529891 490 ntBASIC20.52■□□□□ 0.87
CGNL1Q0VF96 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 AL118558.3-201ENST00000607414 1079 ntBASIC20.52■□□□□ 0.87
CGNL1Q0VF96 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
CGNL1Q0VF96 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 AC023090.2-201ENST00000625182 2110 ntBASIC20.51■□□□□ 0.87
CGNL1Q0VF96 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 HYMAI-201ENST00000635591 3347 ntBASIC20.51■□□□□ 0.87
CGNL1Q0VF96 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 AC004945.1-201ENST00000416738 983 ntBASIC20.51■□□□□ 0.87
CGNL1Q0VF96 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 HIST2H2BB-201ENST00000449108 381 ntBASIC20.51■□□□□ 0.87
CGNL1Q0VF96 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.51■□□□□ 0.87
CGNL1Q0VF96 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms