Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.26□□□□□ -0.29
UBA52P62987 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 COX5BP8-201ENST00000416911 349 ntBASIC13.26□□□□□ -0.29
UBA52P62987 KRT17P7-201ENST00000451704 1104 ntBASIC13.26□□□□□ -0.29
UBA52P62987 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 HLA-V-204ENST00000476601 1289 ntBASIC13.26□□□□□ -0.29
UBA52P62987 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.26□□□□□ -0.29
UBA52P62987 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.26□□□□□ -0.29
UBA52P62987 AC126365.1-201ENST00000578585 1514 ntBASIC13.26□□□□□ -0.29
UBA52P62987 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 AC073389.1-201ENST00000595595 795 ntBASIC13.26□□□□□ -0.29
UBA52P62987 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 AL359881.2-201ENST00000602973 570 ntBASIC13.26□□□□□ -0.29
UBA52P62987 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 LINC01230-201ENST00000625222 3017 ntBASIC13.26□□□□□ -0.29
UBA52P62987 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
UBA52P62987 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 HSPA7-201ENST00000445535 1927 ntBASIC13.25□□□□□ -0.29
UBA52P62987 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 AL592424.1-201ENST00000563624 1536 ntBASIC13.25□□□□□ -0.29
UBA52P62987 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 KRT8P44-201ENST00000441609 1350 ntBASIC13.25□□□□□ -0.29
UBA52P62987 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.25□□□□□ -0.29
UBA52P62987 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.25□□□□□ -0.29
UBA52P62987 HLA-H-201ENST00000383620 1096 ntBASIC13.25□□□□□ -0.29
UBA52P62987 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 AC007274.1-201ENST00000439805 662 ntBASIC13.25□□□□□ -0.29
UBA52P62987 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 SPTLC1P1-201ENST00000447199 261 ntBASIC13.25□□□□□ -0.29
UBA52P62987 MEIS3P1-201ENST00000495167 958 ntBASIC13.25□□□□□ -0.29
UBA52P62987 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.25□□□□□ -0.29
UBA52P62987 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.25□□□□□ -0.29
UBA52P62987 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 CICP17-201ENST00000418553 2377 ntBASIC13.25□□□□□ -0.29
UBA52P62987 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
UBA52P62987 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBA52P62987 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms