Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 AC009078.2-202ENST00000463353 338 ntBASIC11.94□□□□□ -0.5
ERVFC1-1P60608 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 AC093909.1-201ENST00000504731 1122 ntBASIC11.94□□□□□ -0.5
ERVFC1-1P60608 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 MIR4313-201ENST00000580760 101 ntBASIC11.94□□□□□ -0.5
ERVFC1-1P60608 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 AP005117.1-201ENST00000584346 1413 ntBASIC11.94□□□□□ -0.5
ERVFC1-1P60608 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.94□□□□□ -0.5
ERVFC1-1P60608 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 AC105206.1-202ENST00000314927 2368 ntBASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 AC004899.2-201ENST00000622993 3860 ntBASIC11.93□□□□□ -0.5
ERVFC1-1P60608 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 AF186996.4-201ENST00000467186 377 ntBASIC11.93□□□□□ -0.5
ERVFC1-1P60608 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.93□□□□□ -0.5
ERVFC1-1P60608 GGTLC5P-201ENST00000617623 998 ntBASIC11.93□□□□□ -0.5
ERVFC1-1P60608 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ERVFC1-1P60608 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms