Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RHBDL3P58872 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RHBDL3P58872 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 AC138035.3-201ENST00000622706 2791 ntBASIC17.76■□□□□ 0.43
RHBDL3P58872 AC008132.1-202ENST00000342005 1389 ntBASIC17.76■□□□□ 0.43
RHBDL3P58872 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDL3P58872 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.76■□□□□ 0.43
RHBDL3P58872 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDL3P58872 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 AC013726.1-201ENST00000563747 2285 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 AC132872.4-202ENST00000622924 2756 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
RHBDL3P58872 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 AC007292.2-201ENST00000593524 1812 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.75■□□□□ 0.43
RHBDL3P58872 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RHBDL3P58872 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.75■□□□□ 0.43
RHBDL3P58872 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 MIR769-201ENST00000390225 118 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.75■□□□□ 0.43
RHBDL3P58872 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 AL008707.1-201ENST00000422498 534 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 FAM58BP-201ENST00000439056 645 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.75■□□□□ 0.43
RHBDL3P58872 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.75■□□□□ 0.43
RHBDL3P58872 IMP3P2-201ENST00000489760 475 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.75■□□□□ 0.43
RHBDL3P58872 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.75■□□□□ 0.43
RHBDL3P58872 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 RN7SL574P-201ENST00000581512 297 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.75■□□□□ 0.43
RHBDL3P58872 AC091812.3-201ENST00000621362 345 ntBASIC17.75■□□□□ 0.43
RHBDL3P58872 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.75■□□□□ 0.43
RHBDL3P58872 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RHBDL3P58872 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDL3P58872 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDL3P58872 MBLAC2-202ENST00000514906 1936 ntBASIC17.74■□□□□ 0.43
RHBDL3P58872 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RHBDL3P58872 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.74■□□□□ 0.43
RHBDL3P58872 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDL3P58872 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.74■□□□□ 0.43
RHBDL3P58872 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDL3P58872 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.74■□□□□ 0.43
RHBDL3P58872 UPF3AP2-201ENST00000457924 1132 ntBASIC17.74■□□□□ 0.43
RHBDL3P58872 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 AC024681.1-201ENST00000521917 487 ntBASIC17.74■□□□□ 0.43
RHBDL3P58872 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.74■□□□□ 0.43
RHBDL3P58872 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDL3P58872 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.74■□□□□ 0.43
RHBDL3P58872 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 AP000346.4-201ENST00000614827 381 ntBASIC17.74■□□□□ 0.43
RHBDL3P58872 AC100757.4-201ENST00000626934 759 ntBASIC17.74■□□□□ 0.43
RHBDL3P58872 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RHBDL3P58872 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDL3P58872 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDL3P58872 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms