Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 CD8B2-202ENST00000417670 633 ntBASIC11.33□□□□□ -0.6
CMC4P56277 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 AC234783.1-201ENST00000441761 496 ntBASIC11.33□□□□□ -0.6
CMC4P56277 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.33□□□□□ -0.6
CMC4P56277 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
CMC4P56277 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CMC4P56277 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.32□□□□□ -0.6
CMC4P56277 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.32□□□□□ -0.6
CMC4P56277 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.32□□□□□ -0.6
CMC4P56277 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CMC4P56277 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
CMC4P56277 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
CMC4P56277 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.32□□□□□ -0.6
CMC4P56277 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.32□□□□□ -0.6
CMC4P56277 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.32□□□□□ -0.6
CMC4P56277 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.32□□□□□ -0.6
CMC4P56277 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.32□□□□□ -0.6
CMC4P56277 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.32□□□□□ -0.6
CMC4P56277 RNU1-114P-201ENST00000365297 166 ntBASIC11.32□□□□□ -0.6
CMC4P56277 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.32□□□□□ -0.6
CMC4P56277 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CMC4P56277 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CMC4P56277 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.32□□□□□ -0.6
CMC4P56277 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.32□□□□□ -0.6
CMC4P56277 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.32□□□□□ -0.6
CMC4P56277 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CMC4P56277 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.32□□□□□ -0.6
CMC4P56277 GPR53P-205ENST00000457298 1084 ntBASIC11.32□□□□□ -0.6
CMC4P56277 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms