Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
EPHA4P54764 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.65□□□□□ -0.06
EPHA4P54764 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.65□□□□□ -0.06
EPHA4P54764 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EPHA4P54764 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
EPHA4P54764 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA4P54764 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA4P54764 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.64□□□□□ -0.07
EPHA4P54764 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 PRAL-201ENST00000624952 3286 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.64□□□□□ -0.07
EPHA4P54764 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
EPHA4P54764 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
EPHA4P54764 MTATP6P19-201ENST00000413797 659 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 AC079178.1-201ENST00000420915 656 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EPHA4P54764 FTLP10-202ENST00000505798 471 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 COX5BP1-201ENST00000507622 393 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.64□□□□□ -0.07
EPHA4P54764 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.64□□□□□ -0.07
EPHA4P54764 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.64□□□□□ -0.07
EPHA4P54764 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA4P54764 RN7SL713P-201ENST00000582127 302 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 ZACNP1-201ENST00000612259 710 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 AC005786.4-201ENST00000623369 682 ntBASIC14.64□□□□□ -0.07
EPHA4P54764 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.64□□□□□ -0.07
EPHA4P54764 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
EPHA4P54764 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
EPHA4P54764 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EPHA4P54764 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.64□□□□□ -0.07
EPHA4P54764 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
EPHA4P54764 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EPHA4P54764 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
EPHA4P54764 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 KRT8P44-201ENST00000441609 1350 ntBASIC14.63□□□□□ -0.07
EPHA4P54764 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.63□□□□□ -0.07
EPHA4P54764 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
EPHA4P54764 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.63□□□□□ -0.07
EPHA4P54764 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.63□□□□□ -0.07
EPHA4P54764 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
EPHA4P54764 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.63□□□□□ -0.07
EPHA4P54764 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.63□□□□□ -0.07
EPHA4P54764 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.63□□□□□ -0.07
EPHA4P54764 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
EPHA4P54764 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.63□□□□□ -0.07
EPHA4P54764 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.63□□□□□ -0.07
EPHA4P54764 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EPHA4P54764 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.63□□□□□ -0.07
EPHA4P54764 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.63□□□□□ -0.07
EPHA4P54764 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms