Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.8□□□□□ -0.04
PDX1P52945 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 RPSAP36-202ENST00000494591 1261 ntBASIC14.8□□□□□ -0.04
PDX1P52945 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 AP001258.2-201ENST00000529891 490 ntBASIC14.8□□□□□ -0.04
PDX1P52945 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.8□□□□□ -0.04
PDX1P52945 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.8□□□□□ -0.04
PDX1P52945 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 AC022532.1-201ENST00000624563 1728 ntBASIC14.8□□□□□ -0.04
PDX1P52945 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PDX1P52945 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 BTBD6P1-201ENST00000412176 1267 ntBASIC14.79□□□□□ -0.04
PDX1P52945 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.79□□□□□ -0.04
PDX1P52945 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.79□□□□□ -0.04
PDX1P52945 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.79□□□□□ -0.04
PDX1P52945 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.79□□□□□ -0.04
PDX1P52945 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.79□□□□□ -0.04
PDX1P52945 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 EEF1DP1-201ENST00000585891 896 ntBASIC14.79□□□□□ -0.04
PDX1P52945 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.79□□□□□ -0.04
PDX1P52945 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.79□□□□□ -0.04
PDX1P52945 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDX1P52945 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.79□□□□□ -0.04
PDX1P52945 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.78□□□□□ -0.04
PDX1P52945 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.78□□□□□ -0.04
PDX1P52945 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.78□□□□□ -0.04
PDX1P52945 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDX1P52945 AC148477.4-201ENST00000613430 1793 ntBASIC14.78□□□□□ -0.04
PDX1P52945 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 DBET-201ENST00000630918 3363 ntBASIC14.78□□□□□ -0.04
PDX1P52945 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.78□□□□□ -0.04
PDX1P52945 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDX1P52945 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms