Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCA4P51532 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC26.33■■□□□ 1.81
SMARCA4P51532 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCA4P51532 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
SMARCA4P51532 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCA4P51532 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC26.32■■□□□ 1.8
SMARCA4P51532 AC108734.2-201ENST00000420887 1069 ntBASIC26.32■■□□□ 1.8
SMARCA4P51532 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 AC093826.1-201ENST00000508655 993 ntBASIC26.32■■□□□ 1.8
SMARCA4P51532 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC26.32■■□□□ 1.8
SMARCA4P51532 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC26.32■■□□□ 1.8
SMARCA4P51532 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 THY1-209ENST00000580275 578 ntTSL 3 BASIC26.32■■□□□ 1.8
SMARCA4P51532 RN7SL357P-201ENST00000581065 298 ntBASIC26.32■■□□□ 1.8
SMARCA4P51532 RNF146-211ENST00000609447 607 ntTSL 4 BASIC26.32■■□□□ 1.8
SMARCA4P51532 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC26.32■■□□□ 1.8
SMARCA4P51532 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC26.32■■□□□ 1.8
SMARCA4P51532 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC26.32■■□□□ 1.8
SMARCA4P51532 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SMARCA4P51532 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
SMARCA4P51532 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 KRT17P4-201ENST00000429445 819 ntBASIC26.32■■□□□ 1.8
SMARCA4P51532 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC26.32■■□□□ 1.8
SMARCA4P51532 DDX39AP1-201ENST00000445147 1181 ntBASIC26.32■■□□□ 1.8
SMARCA4P51532 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
SMARCA4P51532 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC26.32■■□□□ 1.8
SMARCA4P51532 DRG2-220ENST00000583355 891 ntTSL 3 BASIC26.32■■□□□ 1.8
SMARCA4P51532 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCA4P51532 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SMARCA4P51532 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCA4P51532 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCA4P51532 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC26.31■■□□□ 1.8
SMARCA4P51532 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC26.31■■□□□ 1.8
SMARCA4P51532 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SMARCA4P51532 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC26.31■■□□□ 1.8
SMARCA4P51532 AQP7P5-201ENST00000428759 1049 ntBASIC26.31■■□□□ 1.8
SMARCA4P51532 AQP7P4-201ENST00000447083 1042 ntBASIC26.31■■□□□ 1.8
SMARCA4P51532 AQP7P2-201ENST00000453967 1041 ntBASIC26.31■■□□□ 1.8
SMARCA4P51532 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 RPL18AP8-201ENST00000486071 528 ntBASIC26.31■■□□□ 1.8
SMARCA4P51532 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCA4P51532 AQP7P3-201ENST00000624547 1041 ntBASIC26.31■■□□□ 1.8
SMARCA4P51532 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC26.31■■□□□ 1.8
SMARCA4P51532 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCA4P51532 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCA4P51532 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC26.3■■□□□ 1.8
SMARCA4P51532 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC26.3■■□□□ 1.8
SMARCA4P51532 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC26.3■■□□□ 1.8
SMARCA4P51532 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC26.3■■□□□ 1.8
SMARCA4P51532 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC26.3■■□□□ 1.8
SMARCA4P51532 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC26.3■■□□□ 1.8
SMARCA4P51532 AC027139.1-201ENST00000565286 951 ntBASIC26.3■■□□□ 1.8
SMARCA4P51532 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC26.3■■□□□ 1.8
SMARCA4P51532 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC26.3■■□□□ 1.8
SMARCA4P51532 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC26.3■■□□□ 1.8
SMARCA4P51532 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC26.3■■□□□ 1.8
SMARCA4P51532 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SMARCA4P51532 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 AL672207.1-201ENST00000328462 1570 ntBASIC26.3■■□□□ 1.8
SMARCA4P51532 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
SMARCA4P51532 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCA4P51532 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC26.3■■□□□ 1.8
SMARCA4P51532 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC26.29■■□□□ 1.8
SMARCA4P51532 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCA4P51532 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms