Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AL512306.1-201ENST00000432698 848 ntBASIC16.73■□□□□ 0.27
CENPFP49454 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 AC011471.3-201ENST00000623576 402 ntBASIC16.73■□□□□ 0.27
CENPFP49454 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CENPFP49454 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CENPFP49454 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CENPFP49454 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.73■□□□□ 0.27
CENPFP49454 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CENPFP49454 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 AL807761.2-201ENST00000422849 729 ntBASIC16.73■□□□□ 0.27
CENPFP49454 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.73■□□□□ 0.27
CENPFP49454 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.73■□□□□ 0.27
CENPFP49454 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CENPFP49454 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CENPFP49454 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CENPFP49454 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 AL391005.1-201ENST00000623953 2435 ntBASIC16.72■□□□□ 0.27
CENPFP49454 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 AL157407.1-201ENST00000435784 904 ntBASIC16.72■□□□□ 0.27
CENPFP49454 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 AC244197.1-201ENST00000456494 951 ntBASIC16.72■□□□□ 0.27
CENPFP49454 AC007952.4-201ENST00000573866 637 ntBASIC16.72■□□□□ 0.27
CENPFP49454 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.72■□□□□ 0.27
CENPFP49454 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CENPFP49454 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.72■□□□□ 0.27
CENPFP49454 TREHP1-201ENST00000531328 465 ntBASIC16.72■□□□□ 0.27
CENPFP49454 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.72■□□□□ 0.27
CENPFP49454 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CENPFP49454 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.72■□□□□ 0.27
CENPFP49454 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CENPFP49454 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.72■□□□□ 0.27
CENPFP49454 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.72■□□□□ 0.27
CENPFP49454 BANF1P3-201ENST00000412556 261 ntBASIC16.72■□□□□ 0.27
CENPFP49454 DUTP3-201ENST00000450025 415 ntBASIC16.72■□□□□ 0.27
CENPFP49454 RN7SL81P-201ENST00000493781 261 ntBASIC16.72■□□□□ 0.27
CENPFP49454 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.72■□□□□ 0.27
CENPFP49454 AC055811.3-201ENST00000584952 686 ntBASIC16.72■□□□□ 0.27
CENPFP49454 AC009145.4-201ENST00000625119 1294 ntBASIC16.72■□□□□ 0.27
CENPFP49454 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.72■□□□□ 0.27
CENPFP49454 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.71■□□□□ 0.27
CENPFP49454 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CENPFP49454 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CENPFP49454 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.71■□□□□ 0.27
CENPFP49454 AC084752.1-201ENST00000509766 622 ntBASIC16.71■□□□□ 0.27
CENPFP49454 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.71■□□□□ 0.27
CENPFP49454 AC090510.3-201ENST00000615831 821 ntBASIC16.71■□□□□ 0.27
CENPFP49454 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.71■□□□□ 0.27
CENPFP49454 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.71■□□□□ 0.27
CENPFP49454 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CENPFP49454 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CENPFP49454 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CENPFP49454 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CENPFP49454 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPFP49454 FRMPD2B-201ENST00000431305 1347 ntBASIC16.7■□□□□ 0.26
CENPFP49454 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPFP49454 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPFP49454 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms