Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 FAM58BP-201ENST00000439056 645 ntBASIC19.03■□□□□ 0.64
COL15A1P39059 AC073150.1-201ENST00000450406 1084 ntBASIC19.03■□□□□ 0.64
COL15A1P39059 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 AC019193.1-201ENST00000506678 823 ntBASIC19.03■□□□□ 0.64
COL15A1P39059 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.03■□□□□ 0.64
COL15A1P39059 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.03■□□□□ 0.64
COL15A1P39059 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
COL15A1P39059 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.03■□□□□ 0.64
COL15A1P39059 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.02■□□□□ 0.64
COL15A1P39059 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 FGFR3P1-201ENST00000449999 601 ntBASIC19.02■□□□□ 0.64
COL15A1P39059 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 AC006453.1-201ENST00000636037 1257 ntBASIC19.02■□□□□ 0.64
COL15A1P39059 NAP1L6-202ENST00000641404 1222 ntBASIC19.02■□□□□ 0.64
COL15A1P39059 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.02■□□□□ 0.64
COL15A1P39059 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL15A1P39059 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COL15A1P39059 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.02■□□□□ 0.63
COL15A1P39059 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL15A1P39059 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.02■□□□□ 0.63
COL15A1P39059 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 MBLAC2-202ENST00000514906 1936 ntBASIC19.01■□□□□ 0.63
COL15A1P39059 AL138725.1-201ENST00000407347 1314 ntBASIC19.01■□□□□ 0.63
COL15A1P39059 AL008718.2-201ENST00000609206 1313 ntBASIC19.01■□□□□ 0.63
COL15A1P39059 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.01■□□□□ 0.63
COL15A1P39059 AL359258.3-201ENST00000622910 2331 ntBASIC19.01■□□□□ 0.63
COL15A1P39059 AC046158.3-201ENST00000624947 2558 ntBASIC19.01■□□□□ 0.63
COL15A1P39059 AC022532.1-201ENST00000624563 1728 ntBASIC19.01■□□□□ 0.63
COL15A1P39059 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.01■□□□□ 0.63
COL15A1P39059 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL15A1P39059 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.01■□□□□ 0.63
COL15A1P39059 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
COL15A1P39059 IGLV3-15-201ENST00000518356 244 ntBASIC19.01■□□□□ 0.63
COL15A1P39059 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.01■□□□□ 0.63
COL15A1P39059 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.01■□□□□ 0.63
COL15A1P39059 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.01■□□□□ 0.63
COL15A1P39059 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.01■□□□□ 0.63
COL15A1P39059 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.01■□□□□ 0.63
COL15A1P39059 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.01■□□□□ 0.63
COL15A1P39059 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.01■□□□□ 0.63
COL15A1P39059 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.01■□□□□ 0.63
COL15A1P39059 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL15A1P39059 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
COL15A1P39059 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COL15A1P39059 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL15A1P39059 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COL15A1P39059 FAM90A7P-201ENST00000382628 1395 ntBASIC19■□□□□ 0.63
COL15A1P39059 FAM90A23P-201ENST00000400136 1395 ntBASIC19■□□□□ 0.63
COL15A1P39059 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL15A1P39059 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19■□□□□ 0.63
COL15A1P39059 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COL15A1P39059 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19■□□□□ 0.63
COL15A1P39059 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19■□□□□ 0.63
COL15A1P39059 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COL15A1P39059 MIR3147-201ENST00000577811 66 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms