Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RPL13AP20-201ENST00000459725 609 ntBASIC14.95□□□□□ -0.02
TRIM23P36406 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 FTLP10-202ENST00000505798 471 ntBASIC14.95□□□□□ -0.02
TRIM23P36406 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 AC138466.3-201ENST00000619983 221 ntBASIC14.95□□□□□ -0.02
TRIM23P36406 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 AC144831.1-201ENST00000573312 2656 ntBASIC14.95□□□□□ -0.02
TRIM23P36406 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRIM23P36406 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 AC126177.1-201ENST00000547829 2218 ntBASIC14.94□□□□□ -0.02
TRIM23P36406 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM23P36406 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
TRIM23P36406 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRIM23P36406 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM23P36406 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM23P36406 AC106820.3-201ENST00000561653 397 ntBASIC14.94□□□□□ -0.02
TRIM23P36406 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.94□□□□□ -0.02
TRIM23P36406 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM23P36406 MIR6869-201ENST00000619434 62 ntBASIC14.94□□□□□ -0.02
TRIM23P36406 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
TRIM23P36406 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 LILRP1-201ENST00000444199 1370 ntBASIC14.94□□□□□ -0.02
TRIM23P36406 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 DBET-201ENST00000630918 3363 ntBASIC14.94□□□□□ -0.02
TRIM23P36406 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM23P36406 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM23P36406 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM23P36406 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRIM23P36406 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM23P36406 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TRIM23P36406 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 AC022532.1-201ENST00000624563 1728 ntBASIC14.93□□□□□ -0.02
TRIM23P36406 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms