Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.89■□□□□ 0.61
RFC4P35249 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.89■□□□□ 0.61
RFC4P35249 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RFC4P35249 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 AL139384.1-201ENST00000612143 3047 ntBASIC18.88■□□□□ 0.61
RFC4P35249 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 AL603832.2-201ENST00000566195 2125 ntBASIC18.88■□□□□ 0.61
RFC4P35249 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 CTBP2P4-201ENST00000513884 920 ntBASIC18.88■□□□□ 0.61
RFC4P35249 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 AL157813.1-201ENST00000612996 587 ntBASIC18.88■□□□□ 0.61
RFC4P35249 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 CICP13-201ENST00000422015 2789 ntBASIC18.88■□□□□ 0.61
RFC4P35249 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFC4P35249 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFC4P35249 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
RFC4P35249 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC4P35249 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.87■□□□□ 0.61
RFC4P35249 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC4P35249 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC4P35249 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC4P35249 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.87■□□□□ 0.61
RFC4P35249 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC4P35249 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.87■□□□□ 0.61
RFC4P35249 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.87■□□□□ 0.61
RFC4P35249 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RFC4P35249 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC4P35249 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFC4P35249 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC4P35249 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.87■□□□□ 0.61
RFC4P35249 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC4P35249 AL359258.3-201ENST00000622910 2331 ntBASIC18.86■□□□□ 0.61
RFC4P35249 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC4P35249 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC4P35249 REXO1L4P-201ENST00000605109 1937 ntBASIC18.86■□□□□ 0.61
RFC4P35249 AC025271.4-201ENST00000621477 1726 ntBASIC18.86■□□□□ 0.61
RFC4P35249 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC4P35249 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC4P35249 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms