Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 POM121L9P-203ENST00000441984 1285 ntBASIC13.11□□□□□ -0.31
CD40P25942 RPL13AP20-201ENST00000459725 609 ntBASIC13.11□□□□□ -0.31
CD40P25942 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40P25942 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40P25942 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40P25942 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40P25942 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40P25942 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40P25942 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CD40P25942 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CD40P25942 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 AC112693.3-201ENST00000624819 1983 ntBASIC13.11□□□□□ -0.31
CD40P25942 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.1□□□□□ -0.31
CD40P25942 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.1□□□□□ -0.31
CD40P25942 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CD40P25942 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40P25942 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40P25942 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.1□□□□□ -0.31
CD40P25942 MIR4538-201ENST00000581377 78 ntBASIC13.1□□□□□ -0.31
CD40P25942 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40P25942 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.1□□□□□ -0.31
CD40P25942 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
CD40P25942 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40P25942 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40P25942 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD40P25942 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CD40P25942 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.09□□□□□ -0.31
CD40P25942 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.09□□□□□ -0.31
CD40P25942 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.09□□□□□ -0.31
CD40P25942 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.09□□□□□ -0.31
CD40P25942 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD40P25942 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD40P25942 AC126365.1-201ENST00000578585 1514 ntBASIC13.09□□□□□ -0.31
CD40P25942 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD40P25942 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.09□□□□□ -0.31
CD40P25942 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD40P25942 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD40P25942 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CD40P25942 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD40P25942 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.09□□□□□ -0.31
CD40P25942 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CD40P25942 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms