Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LAMA1P25391 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LAMA1P25391 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.53□□□□□ -0.08
LAMA1P25391 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.53□□□□□ -0.08
LAMA1P25391 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.53□□□□□ -0.08
LAMA1P25391 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.53□□□□□ -0.08
LAMA1P25391 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.53□□□□□ -0.08
LAMA1P25391 AC103810.10-201ENST00000606504 343 ntBASIC14.53□□□□□ -0.08
LAMA1P25391 AC107464.3-201ENST00000609172 737 ntBASIC14.53□□□□□ -0.08
LAMA1P25391 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LAMA1P25391 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
LAMA1P25391 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 AC090502.4-201ENST00000551714 1386 ntBASIC14.53□□□□□ -0.08
LAMA1P25391 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.53□□□□□ -0.08
LAMA1P25391 AC026320.2-201ENST00000434379 478 ntBASIC14.53□□□□□ -0.08
LAMA1P25391 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
LAMA1P25391 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.53□□□□□ -0.08
LAMA1P25391 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 AL360270.3-201ENST00000609118 1348 ntBASIC14.53□□□□□ -0.08
LAMA1P25391 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.53□□□□□ -0.08
LAMA1P25391 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.53□□□□□ -0.08
LAMA1P25391 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LAMA1P25391 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LAMA1P25391 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LAMA1P25391 HIST2H2BA-201ENST00000412169 381 ntBASIC14.52□□□□□ -0.08
LAMA1P25391 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.52□□□□□ -0.08
LAMA1P25391 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.52□□□□□ -0.08
LAMA1P25391 AL132780.4-201ENST00000624870 1135 ntBASIC14.52□□□□□ -0.08
LAMA1P25391 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LAMA1P25391 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.52□□□□□ -0.08
LAMA1P25391 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LAMA1P25391 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.52□□□□□ -0.08
LAMA1P25391 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.52□□□□□ -0.08
LAMA1P25391 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.52□□□□□ -0.08
LAMA1P25391 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LAMA1P25391 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LAMA1P25391 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LAMA1P25391 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.52□□□□□ -0.08
LAMA1P25391 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
LAMA1P25391 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.52□□□□□ -0.08
LAMA1P25391 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
LAMA1P25391 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.52□□□□□ -0.09
LAMA1P25391 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.52□□□□□ -0.09
LAMA1P25391 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.52□□□□□ -0.09
LAMA1P25391 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
LAMA1P25391 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LAMA1P25391 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.52□□□□□ -0.09
LAMA1P25391 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.52□□□□□ -0.09
LAMA1P25391 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.52□□□□□ -0.09
LAMA1P25391 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.52□□□□□ -0.09
LAMA1P25391 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.52□□□□□ -0.09
LAMA1P25391 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.52□□□□□ -0.09
LAMA1P25391 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.52□□□□□ -0.09
LAMA1P25391 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.51□□□□□ -0.09
LAMA1P25391 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.51□□□□□ -0.09
LAMA1P25391 AC018629.1-201ENST00000623381 1736 ntBASIC14.51□□□□□ -0.09
LAMA1P25391 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 RN7SL396P-201ENST00000471086 295 ntBASIC14.51□□□□□ -0.09
LAMA1P25391 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LAMA1P25391 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms