Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CXCL3P19876 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CXCL3P19876 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CXCL3P19876 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CXCL3P19876 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CXCL3P19876 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCL3P19876 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL3P19876 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.82□□□□□ -0.36
CXCL3P19876 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.82□□□□□ -0.36
CXCL3P19876 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.82□□□□□ -0.36
CXCL3P19876 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.82□□□□□ -0.36
CXCL3P19876 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 PMS2P7-201ENST00000506558 1336 ntBASIC12.82□□□□□ -0.36
CXCL3P19876 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL3P19876 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 REXO1L4P-201ENST00000605109 1937 ntBASIC12.82□□□□□ -0.36
CXCL3P19876 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL3P19876 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL3P19876 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.81□□□□□ -0.36
CXCL3P19876 KRT16P4-201ENST00000453883 522 ntBASIC12.81□□□□□ -0.36
CXCL3P19876 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms