Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.61■□□□□ 0.09
HMGA1P17096 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGA1P17096 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.61■□□□□ 0.09
HMGA1P17096 NDUFV2P1-201ENST00000596415 907 ntBASIC15.61■□□□□ 0.09
HMGA1P17096 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.61■□□□□ 0.09
HMGA1P17096 AC008825.2-201ENST00000603374 718 ntBASIC15.61■□□□□ 0.09
HMGA1P17096 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
HMGA1P17096 AL021578.1-201ENST00000613646 709 ntBASIC15.61■□□□□ 0.09
HMGA1P17096 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HMGA1P17096 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGA1P17096 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HMGA1P17096 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HMGA1P17096 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGA1P17096 AC105917.1-201ENST00000506637 2539 ntBASIC15.61■□□□□ 0.09
HMGA1P17096 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGA1P17096 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
HMGA1P17096 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGA1P17096 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA1P17096 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGA1P17096 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGA1P17096 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 AC004899.1-201ENST00000424687 1714 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 SALL4P5-201ENST00000419001 1760 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HMGA1P17096 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 AC104073.2-201ENST00000453737 312 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.6■□□□□ 0.09
HMGA1P17096 AC005740.2-201ENST00000511085 419 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 AC022217.1-201ENST00000521069 738 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.6■□□□□ 0.09
HMGA1P17096 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGA1P17096 AC100827.2-201ENST00000563214 1194 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.6■□□□□ 0.09
HMGA1P17096 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGA1P17096 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 BX088702.1-201ENST00000610784 235 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
HMGA1P17096 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGA1P17096 AC004923.1-202ENST00000642106 209 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGA1P17096 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 TUBBP5-203ENST00000508529 1334 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
HMGA1P17096 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGA1P17096 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
HMGA1P17096 AC006058.4-201ENST00000624016 1670 ntBASIC15.6■□□□□ 0.09
HMGA1P17096 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HMGA1P17096 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HMGA1P17096 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGA1P17096 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGA1P17096 CICP6-201ENST00000457191 2729 ntBASIC15.59■□□□□ 0.09
HMGA1P17096 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGA1P17096 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGA1P17096 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HMGA1P17096 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGA1P17096 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGA1P17096 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGA1P17096 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGA1P17096 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms