Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.18□□□□□ -0.14
UBL4AP11441 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.18□□□□□ -0.14
UBL4AP11441 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.18□□□□□ -0.14
UBL4AP11441 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.18□□□□□ -0.14
UBL4AP11441 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.18□□□□□ -0.14
UBL4AP11441 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 UGT1A2P-201ENST00000454886 866 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.18□□□□□ -0.14
UBL4AP11441 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
UBL4AP11441 AC023310.3-201ENST00000557027 670 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.18□□□□□ -0.14
UBL4AP11441 AC100756.1-201ENST00000562736 682 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 AC138749.3-201ENST00000567691 622 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 AC116165.1-201ENST00000611806 668 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 AC004790.1-201ENST00000612686 536 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 AJ011932.1-201ENST00000621707 465 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UBL4AP11441 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBL4AP11441 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
UBL4AP11441 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
UBL4AP11441 CLK3P2-201ENST00000427566 1453 ntBASIC14.18□□□□□ -0.14
UBL4AP11441 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UBL4AP11441 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
UBL4AP11441 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
UBL4AP11441 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.17□□□□□ -0.14
UBL4AP11441 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.17□□□□□ -0.14
UBL4AP11441 AC011467.4-201ENST00000594891 528 ntBASIC14.17□□□□□ -0.14
UBL4AP11441 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 WASH3P-207ENST00000560956 1394 ntBASIC14.17□□□□□ -0.14
UBL4AP11441 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 MROH4P-201ENST00000431302 1578 ntBASIC14.17□□□□□ -0.14
UBL4AP11441 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
UBL4AP11441 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.17□□□□□ -0.14
UBL4AP11441 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBL4AP11441 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms