Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.9■□□□□ 0.46
TOP1P11387 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.9■□□□□ 0.46
TOP1P11387 C2orf27AP3-201ENST00000434123 579 ntBASIC17.9■□□□□ 0.46
TOP1P11387 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 RPL7P3-201ENST00000441388 714 ntBASIC17.9■□□□□ 0.46
TOP1P11387 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
TOP1P11387 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.9■□□□□ 0.46
TOP1P11387 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.9■□□□□ 0.46
TOP1P11387 AP000812.2-201ENST00000538934 718 ntBASIC17.9■□□□□ 0.46
TOP1P11387 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.9■□□□□ 0.46
TOP1P11387 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 AC244669.2-201ENST00000612320 853 ntBASIC17.9■□□□□ 0.46
TOP1P11387 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 AL354718.3-201ENST00000616414 581 ntBASIC17.9■□□□□ 0.46
TOP1P11387 CR382287.1-201ENST00000623954 586 ntBASIC17.9■□□□□ 0.46
TOP1P11387 COX11-210ENST00000639671 696 ntBASIC17.9■□□□□ 0.46
TOP1P11387 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.9■□□□□ 0.46
TOP1P11387 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TOP1P11387 KRT8P14-201ENST00000414254 1442 ntBASIC17.89■□□□□ 0.46
TOP1P11387 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
TOP1P11387 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TOP1P11387 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TOP1P11387 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TOP1P11387 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TOP1P11387 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TOP1P11387 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.89■□□□□ 0.46
TOP1P11387 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.89■□□□□ 0.46
TOP1P11387 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.89■□□□□ 0.45
TOP1P11387 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.89■□□□□ 0.45
TOP1P11387 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 AL109954.1-202ENST00000564051 2148 ntBASIC17.89■□□□□ 0.45
TOP1P11387 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TOP1P11387 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.89■□□□□ 0.45
TOP1P11387 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.89■□□□□ 0.45
TOP1P11387 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.89■□□□□ 0.45
TOP1P11387 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.89■□□□□ 0.45
TOP1P11387 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.89■□□□□ 0.45
TOP1P11387 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.89■□□□□ 0.45
TOP1P11387 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.89■□□□□ 0.45
TOP1P11387 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.89■□□□□ 0.45
TOP1P11387 AC133552.6-201ENST00000613406 534 ntBASIC17.89■□□□□ 0.45
TOP1P11387 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.89■□□□□ 0.45
TOP1P11387 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.89■□□□□ 0.45
TOP1P11387 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TOP1P11387 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TOP1P11387 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TOP1P11387 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TOP1P11387 C18orf15-201ENST00000623680 2534 ntBASIC17.89■□□□□ 0.45
TOP1P11387 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.89■□□□□ 0.45
TOP1P11387 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TOP1P11387 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.88■□□□□ 0.45
TOP1P11387 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms