Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC130709.1-201ENST00000484779 1212 ntBASIC17.04■□□□□ 0.32
PTPRFP10586 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPRFP10586 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPRFP10586 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 AC005041.3-201ENST00000606287 649 ntBASIC17.04■□□□□ 0.32
PTPRFP10586 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPRFP10586 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPRFP10586 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPRFP10586 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPRFP10586 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPRFP10586 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPRFP10586 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPRFP10586 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPRFP10586 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 AHCYP4-201ENST00000419201 1315 ntBASIC17.04■□□□□ 0.32
PTPRFP10586 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PTPRFP10586 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPRFP10586 RPL8P2-201ENST00000430538 502 ntBASIC17.04■□□□□ 0.32
PTPRFP10586 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPRFP10586 RPSAP15-201ENST00000448168 861 ntBASIC17.04■□□□□ 0.32
PTPRFP10586 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPRFP10586 MIR4649-201ENST00000582839 64 ntBASIC17.04■□□□□ 0.32
PTPRFP10586 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PTPRFP10586 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPRFP10586 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPRFP10586 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTPRFP10586 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPRFP10586 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PTPRFP10586 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPRFP10586 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPRFP10586 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPRFP10586 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PTPRFP10586 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPRFP10586 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 PRAL-201ENST00000624952 3286 ntBASIC17.03■□□□□ 0.32
PTPRFP10586 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPRFP10586 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 AL357563.1-201ENST00000404728 395 ntBASIC17.03■□□□□ 0.32
PTPRFP10586 AC079112.1-201ENST00000454972 939 ntBASIC17.03■□□□□ 0.32
PTPRFP10586 AL031713.1-201ENST00000564813 661 ntBASIC17.03■□□□□ 0.32
PTPRFP10586 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PTPRFP10586 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPRFP10586 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPRFP10586 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.02■□□□□ 0.32
PTPRFP10586 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPRFP10586 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PTPRFP10586 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPRFP10586 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 PCDHA1-201ENST00000378133 2726 ntBASIC17.02■□□□□ 0.32
PTPRFP10586 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPRFP10586 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPRFP10586 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.02■□□□□ 0.32
PTPRFP10586 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
PTPRFP10586 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PTPRFP10586 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTPRFP10586 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPRFP10586 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPRFP10586 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPRFP10586 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPRFP10586 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPRFP10586 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPRFP10586 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPRFP10586 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms